The
Salarchaeum
sp. JOR-1
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
Jor_04935
Gene ID
04935
Gene Name
Jor_04935
Annotation
DNA polymerase II large subunit
Location
chromosome:751412→756457
Gene type
Functional gene
GC content
0.642489100277447
DNA (5046 bp,
Edit
)
>Jor_04935|04935|751412|For|756457
ATGCGCTCCGAGGACGAGGCCTACTTCGAACGACTCGAATCACAGTTGGACGAGGCGTTCGACCTCGCGGAGCGCGCGAA
ACAGCAGGGCGGCGACCCCGAACCCGAGGTGGAGATTCCGGTCGCGAAGGACATGGCCGACCGCGTGGAGAACATCCTCG
GCATCGACGGCGTCGCCGAGCGCGTCCGCGAACTCGAGGGCGAGATGAGTCGGGAGGAGGCCGCGCTCGAACTCACCGAG
GACTTCGTCGAGGGGACGGTCGGCGACTACGAGACCGACGCGGGGAAGGTCGAGGGCGCTGTCCGCACCGCGGTCGCCCT
GCTCACGGAGGGCGTGGTCGCCGCGCCAATCGAGGGCATCGACCGCGTCGAGGTATTGGAGAACGACGACGGCACGGAGT
TCGTGAACGTCTACTACGCCGGCCCCATCCGCTCCGCGGGCGGGACGGCGCAGGCCCTGAGCGTGCTCGTCGCGGACTAC
GCCCGCGCGCTCCTCGGGATGAGCGAGTACACGGGCCGGGACGACGAGATAGAGCGCTACGCCGAGGAGGTCGCGCTCTA
CGACTCCGAGACCGGCCTCCAGTACACGCCGAAGGACACGGAAACAAAATTCATCGCCGAGCACATGCCCATCATGCTCG
ACGGCGAGGCGACGGGCCAGGAGGAGGTCTCGGGCTTTCGCGACCTCGAACGCGTCGACACGAACAACCCCCGGGGCGGC
ATGTGTCTCGTGCTCGCGGAGGGAATCGCGCTCAAGGCCCCGAAGATTCAGCGGTACACGCGCGGCCTCGACGAGGTGGA
CTGGCCGTGGCTCCAGGATCTCATCGACGGCACGTACGACGACACCGACGACGCCGACGACGAGGCTGACGCCGAGAGCG
AGGCCGCCGACGACGAGGCTGACGCCGAGAGCGAGGCCGACACGGCGTCCGACGGGCCGCCCCGAGTGGACTCCTCGGGG
AAGTTCCTCCGCGACCTCATCGCCGGCCGCCCCGTCTTCGGCCACCCCTCTCGCGAAGGCGGGTTCCGATTGCGGTACGG
GCGCGCGCGCAACCACGGCTTTGCGACCGCGGGCGTCCACCCCGCGACGATGCACCTCGTGGACGACTTCCTCGCCACCG
GCACCCAGATCAAGACCGAACGCCCCGGGAAGGCCGCCGGCGTCGTCCCCGTGGACAGCATCGACGGTCCGACCGTCAAA
CTCGCGAACGGCGACGTGCGCCGCATCGACGACCCCCGCGAAGCCCTCGAAGTCCGGAACGGCGTCGAGAGGATCCTCGA
CCTCGGCGAGTACCTCGTGAACTACGGCGAGTTCGTCGAGAACAACCACCCGCTCGCCCCCGCGTCCTACGTCACGGAGT
GGTGGAAACAAGACCTCGACGCGGCCGGCGCGGACGTCCAGGCGCTCGAAGACTCGCCCTACGTCGACCTCGAACACCCG
ACGCCCGAGCAAGCACTCGAGTGGGCGGACGAGTACGACGCCCCGCTCCACCCCGAGTACACCTACCTCTGGCACGACAT
TTCGGTACCTGAGTTCGAAGCGCTCGCGGACGCCGTCGCCCGGGGAGAAATCGACGGCGACGAACTCGTCTTCCCCTACG
ACGAGGATGTCCGTGAGACCGTCGAGGCCCTCATCCTCCCCCACCACCAGGGCGAGTACATCCGCACCACCGACTGGGAG
CCGTTCGTCCGGTCGCTCGGACTCACTACCGACCTCGAAAAACAGTGGGACGCTCTCAGCCCCGACGCGAGAGAGTGGGA
GAACGCGATGAAGGCCGTCGAGGAAGTCGCGCCCTTCTCCGTGCAGGAACGCGCCCCGACCCGCATCGGGAACCGCATGG
GCCGCCCCGAGAAATCCGAATCCCGCGACCTCTCGCCCGCCGTCCACACCCTCTTCCCCATCGGCGAAGCCGGCGGCAGC
CAGCGGAACGTGGCGAAAGCCGCGAAACACGCCCCCGACATGCAGAGCACGCCCGGCCAGATCGACGTGCAACTCGGCGT
CCGCGAGTGCCCCGACTGCAGCCAGCACACCTACGAAGCCCGGTGTCCCGACTGCGAGGTCTGGACCGACCCCTACTACG
AGTGCCCGGACTGCGGCGTCGAAGCCCATCCCGACGAATCCGGCCGCGTCGAATGCCCGCGCTGCGACCGCGAACTCGAC
AACGTCACCACCCAGACCGTCGACCTCCGCCAGGAGTACGCCGACGCCCTCCAATCCGTCGGCGAACGCGAGAACGCCTA
CGACATCCTCAAAGGCGTCAAGGGACTCACCTCCTCCGAGAAAGTCCCCGAACCCATCGAGAAAGGCGTCCTCCGGGCCA
AACACGGCGTCACCACGTTCAAGGACGGCACCGTCCGCTACGACATGACCGACCTCCCCGTCACCTCGGTTCGCCCCAGC
GAACTCGACGTCACCGTCCAGCAGTTCCGCGAACTCGGCTACACCGAGGACATCAACGGCGACCCCCTCCAGCACGATGA
CCAACTCCTCGAACTCAACGTTCAGGACATCGTCCTCAGCGACGGCGCCGCCGAACACATGCTCAAAACCGCCGACTTCG
TCGACGACCTCCTCACCCAATACTACGGCGTCGACCCCTTCTACGAACTCGACGACCGCGACGACCTCGTCGGCGAACTC
GTCTTCGGCATGGCCCCCCACACCAGCGCTGCGACAGTCGGACGCGTCGTCGGCTTCACCAGCGCCGCCGTCGGCTACGC
GCATCCCTACTTCCACGCCGCGAAACGCCGGAATTGTGATGGTGACGAAGATTGCGTGATGCTGTTGATGGACGGTCTGC
TGAACTTCTCGCGGAGTTACTTGCCGGACAAACGTGGGGGAAGTGTCACCGAGGATTCCCGGCTTGTCGCAGTCGACCCA
GAGGACAACGTTCGCTTCCTCACGTTCGACGAACTCTGGAACGAGCTGGAGAGTCCGCTCGAGGTCGATGGGAAGTTCCG
AAAGCGAACCTGTGTTCACGAGGGATGGCGGACGTACGCGTTCGATGAGAACCACCAGGCGTCCCTCCAGCCGATTGAGA
AGGCGATTCGGTATCGTGCGAGCGAGGACGAGGTGATGGTTCGGGTGGAAACGCAGTTCGGACGGTCTCTCGACCTCACC
GAACACCACAGTCTCTTCAGGTACGACGACGGAATCGAGGAGGTCGCGGGGGGCGAACTCGAACCGGGCGACCTCGTCGT
CGCACCACAAAGCCTCGATGTTGAGACCGAGGAGACGACGATTGACGTCCTCGACGCAGTCGAAGAACCATATGTCTTCG
TCGACGATGTCGAGCAGTACCTGACTCGTGTCTGGAACGAGGCCAACCGTGGCGACAAGACTCGGGTCGCGTTCGACGGC
GGACTCTCGTACCGGCTCAGAAAGAAGAAACTCTCCTACGAGATGCTGGAACGACTCTCCGACGAATCCGGAACGACCGC
TCCGGATGAATTCACGGTCGGATTGAAGGGCTCGTCGGACGGTATCGCGCGGTCAATCGATGTCGACGAGGATTTCGCGT
GGCTCCTCGGGATGTTTGTCGCCGAGGGATCACTCTCCACTGCGAACCCGACGATACACAACGCGAACGAGGATCTCATC
GAACAAGTCGTCGAAACAACGGTGTCGGCTCTCGGCGTGGAACCCAACGTTCGCTGGTCGAACAAGGCGTACGAGGTCAG
ATTTCCTGCTGTGTTCCGGGATGTCCTCTATCACCTCGGTTTCGAGGACGTGGACTCGTACGACTCGACCGAGAAAGTAA
TTCCCGAGTGTATCCTCCACGCGCCTGACGAGGTCGCGCTCGCGTTCGTACGGGGATTCATCGCAGGCGATGGTAGCGAG
CCTGCCGATGGCAACGTCACGTCGATTGCCTTCCACACGACGAGCGAGGACGTGAAGGACGGGTTCGTCTTCCTTCTCCA
CCGGTTCGGCCTCGTCGCGAACGTCTCCTATCGAGAGCGTGACGAGACGCGGAACCCGATCTACACTATCACTGTTTCCG
GCGGTGCGTCGGATAATCCTCTTCGCCGTGTCCTGAACGGGGATGAACCCTACCAGCCGAAGAGTCTCGTCGTCACGATT
CCGGAGGCGCTGATGGAGATTCGGAAGATGGACGTTCCCGACGTGAAACAGATTGTACCGAAATACCTGAAGCGCCGAGA
CAACGTCTCCCTGGAGAAGCTCCGCGAGATGGTCGATGAACTCGACGACCAGAACCTCCCGGAGGCTGCCCGTGAGCGGC
TCGACGACATCCGCCCCCTCGTCGACGGCGACCTCTCGTACCTGCGTGTCACTGACGTCGACGCAATCGACTACGACGGC
TACCTCTACGACCTTCAGGTAGGAGGCGACCCCGTATTCACGGCGAACTGGCTCTACGCGCACAACTCGATGGACGCGCC
GCTGGTGATGTCGAGTCGTATCGACCCGTCGGAAATCGACGACGAGGCGCACAACATGGACGTGGTGCGGCAGTATCCGC
GTGAGTTCTACGAGGCGAGTCGGGAGCTGGCTGACCCGGAGTCGGTGGACGTGGAGATCGCGGAGGAGAACCTCGGAACC
GACCTGGAGTACACGGGGTTCGACCACACGCACGACACGTCGAATATCGCGCTCGGCCCCGACCTCTCCGCGTACAAGAC
GCTCGGGAGTATGATGGAGAAGATGGACGCGCAGCTCGAACTCGCCCGGAAGCTCCGCGCCGTCGACGAGACGGACGTGG
CGGAGCGCGTCATCGAGTACCACTTCCTCCCCGACCTCATCGGGAACCTCCGCGCGTTCAGCCGGCAGGAGACCCGGTGT
CTGGACTGCGGGAAGAAATACAGACGAGTCCCGCTCACGGGCGACTGCCGGGAGTGCGGGGGAACCGTGAACCTCACCGT
TCACCGCGGCTCCGTCAACAAGTACATGGACACCGCGATTCAGGTCGCAGAAGAGTACGACTGCCGGGAGTACACCAAGC
AGCGCCTCGAAGTCCTCGAACAATCGCTGGAGAGCGTCTTCGAGAACGACAAGAACAAGCCCACGACTATTGGTGATTTT
ATGTAG
pI
MW (k)
Translation (1682 aa,
Edit
)
>Jor_04935|04935|gene
MRSEDEAYFERLESQLDEAFDLAERAKQQGGDPEPEVEIPVAKDMADRVENILGIDGVAERVRELEGEMSREEAALELTE
DFVEGTVGDYETDAGKVEGAVRTAVALLTEGVVAAPIEGIDRVEVLENDDGTEFVNVYYAGPIRSAGGTAQALSVLVADY
ARALLGMSEYTGRDDEIERYAEEVALYDSETGLQYTPKDTETKFIAEHMPIMLDGEATGQEEVSGFRDLERVDTNNPRGG
MCLVLAEGIALKAPKIQRYTRGLDEVDWPWLQDLIDGTYDDTDDADDEADAESEAADDEADAESEADTASDGPPRVDSSG
KFLRDLIAGRPVFGHPSREGGFRLRYGRARNHGFATAGVHPATMHLVDDFLATGTQIKTERPGKAAGVVPVDSIDGPTVK
LANGDVRRIDDPREALEVRNGVERILDLGEYLVNYGEFVENNHPLAPASYVTEWWKQDLDAAGADVQALEDSPYVDLEHP
TPEQALEWADEYDAPLHPEYTYLWHDISVPEFEALADAVARGEIDGDELVFPYDEDVRETVEALILPHHQGEYIRTTDWE
PFVRSLGLTTDLEKQWDALSPDAREWENAMKAVEEVAPFSVQERAPTRIGNRMGRPEKSESRDLSPAVHTLFPIGEAGGS
QRNVAKAAKHAPDMQSTPGQIDVQLGVRECPDCSQHTYEARCPDCEVWTDPYYECPDCGVEAHPDESGRVECPRCDRELD
NVTTQTVDLRQEYADALQSVGERENAYDILKGVKGLTSSEKVPEPIEKGVLRAKHGVTTFKDGTVRYDMTDLPVTSVRPS
ELDVTVQQFRELGYTEDINGDPLQHDDQLLELNVQDIVLSDGAAEHMLKTADFVDDLLTQYYGVDPFYELDDRDDLVGEL
VFGMAPHTSAATVGRVVGFTSAAVGYAHPYFHAAKRRNCDGDEDCVMLLMDGLLNFSRSYLPDKRGGSVTEDSRLVAVDP
EDNVRFLTFDELWNELESPLEVDGKFRKRTCVHEGWRTYAFDENHQASLQPIEKAIRYRASEDEVMVRVETQFGRSLDLT
EHHSLFRYDDGIEEVAGGELEPGDLVVAPQSLDVETEETTIDVLDAVEEPYVFVDDVEQYLTRVWNEANRGDKTRVAFDG
GLSYRLRKKKLSYEMLERLSDESGTTAPDEFTVGLKGSSDGIARSIDVDEDFAWLLGMFVAEGSLSTANPTIHNANEDLI
EQVVETTVSALGVEPNVRWSNKAYEVRFPAVFRDVLYHLGFEDVDSYDSTEKVIPECILHAPDEVALAFVRGFIAGDGSE
PADGNVTSIAFHTTSEDVKDGFVFLLHRFGLVANVSYRERDETRNPIYTITVSGGASDNPLRRVLNGDEPYQPKSLVVTI
PEALMEIRKMDVPDVKQIVPKYLKRRDNVSLEKLREMVDELDDQNLPEAARERLDDIRPLVDGDLSYLRVTDVDAIDYDG
YLYDLQVGGDPVFTANWLYAHNSMDAPLVMSSRIDPSEIDDEAHNMDVVRQYPREFYEASRELADPESVDVEIAEENLGT
DLEYTGFDHTHDTSNIALGPDLSAYKTLGSMMEKMDAQLELARKLRAVDETDVAERVIEYHFLPDLIGNLRAFSRQETRC
LDCGKKYRRVPLTGDCRECGGTVNLTVHRGSVNKYMDTAIQVAEEYDCREYTKQRLEVLEQSLESVFENDKNKPTTIGDF
M*
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment