The Haloarchaeal Genome Database

Sequence Editor

Input Window (Single sequence only. format: fasta, GCG, or plain sequence. Numbers and spaces are okay.)

Haloferax mediterranei ATCC 33500 plasmid pHM300, complete sequence
gi|389848587|ref|NC_017943.1|:305829-306044  Length: 216  Fri Jul 20 14:06:09 2012  Type: N  Check: 5482  ..

       1  ATGACTCCGG AACAGGGTGG ACACACGCCA CTTTCTCCTC GAGCAAAGCA

      51  GGCTTTCGAG CACCTACAGC CGATTATCGA TGAGTACGAA TCGGGGATGC

     101  CTGTGACGGA CGCACGGCAA CAGTTACAAT CGGCAGACCA AGACCCCGAT

     151  GCTGTCGACG AACTCCTCAA TAAAGGCTAT CTGTACGAAG TTGAGGGACG

     201  CGTGTACGTG ACGTAG

Output Window

Select Operation

Base Operations To RNA To DNA Remove non-DNA characters
Reverse Complimentary Complimentary + Reverse

Formatting Operations To Triplets To Lower Case To Upper Case To Single-lined

Strand Operations To Double Strand To Top Strand To Bottom Strand

Spacing/Numbering Operations Remove Spaces Remove Numbers Remove Spaces and Numbers Number/Re-number It Bases Per Line

Translation Operations Translate It

Sequence Format Format It

Miscellaneous Operations Search sub-sequence