The Haloarchaeal Genome Database

Sequence Editor

Input Window (Single sequence only. format: fasta, GCG, or plain sequence. Numbers and spaces are okay.)

Haloferax mediterranei ATCC 33500 plasmid pHM500, complete sequence
gi|389848879|ref|NC_017944.1|:c485958-485743  Length: 216  Fri Jul 20 14:06:08 2012  Type: N  Check: 6833  ..

       1  GTGTTGTTCG CAGGCGGCCT CGCCGTCCTT GCGATTCGCA GTCTGATGAA

      51  TCTCGAAGGC CGTGTCGGAT ACGCCGAGGC GAAAGGCGTC CCCGAGGCAG

     101  ACAAACTCGT TACGGCCGCG AGCGAACTTC TGCTCGATGG GAGTCTCGGA

     151  ATCGGCTTTT GGAAACTCCC CAAACTGGCA GCAGGACAAC GGCGAGTGGT

     201  ATCTACTCCG ACCTAA

Output Window

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Base Operations To RNA To DNA Remove non-DNA characters
Reverse Complimentary Complimentary + Reverse

Formatting Operations To Triplets To Lower Case To Upper Case To Single-lined

Strand Operations To Double Strand To Top Strand To Bottom Strand

Spacing/Numbering Operations Remove Spaces Remove Numbers Remove Spaces and Numbers Number/Re-number It Bases Per Line

Translation Operations Translate It

Sequence Format Format It

Miscellaneous Operations Search sub-sequence