The
Halobacterium
R1
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
gspE
Gene ID
2215
Gene Name
gspE
Annotation
type II secretion system protein homolog
Location
chromosome:616295←614643
Gene type
Functional gene
GC content
0.658197217180883
Hydropathicity
-0.363272727272728
DNA (1653 bp,
Edit
)
>gspE|2215|616295|Rev|614643
ATGGCTGGGGATCTCTTCGCGGGCCTGGATGGCGGGTTTGATGCGCTACAGCGGCGCGCGAGCCGGATCGTCGAGGTGTT
GCGCGGAACCGCCGTCGACGTTCCACCGTACGACCCACAGGCCCACGGCCCGCTGGTCGAGTTTGACGGGGTGGCGGACT
ACGAGGAGGTCGACCGGTACTGGGTCAACGCCCCCTACGCGTTCGTGTTCATCGGGTTCGACGCCGAATCCGACACCCAC
TACTATCACGTCGTGGAGCCACACCTGGATGACTTCGAGCAGACGGTGTTGGACCAGCTCTACGACGACATCCGGGACGC
GCTCATCTACGATGCCACCACCGATCCCGACGACCGCGAGGCGGTCCTGATCGCGCAGATGCAGCGCCTCCTCTCGGAGT
ACAGCATCGACGTGACGCCGAACGCGTTCCACCGGCTGTTTTACTACTTACACCGCACCTTCGAGGGGTTCGAGAAGCTC
GACCCCGTGATGCAGGACCCCCACATCGAGGACGTGTCGTGCGACGGCTACGGGCTGCCGCTGTTCGTCTACCACACCGA
CTACACGGACATCGAGACCAACATCACCTACGAGCAACAGGAGTTGGACAGCTTCGTCGTGCGCCTCGCCCAGCAGTCCG
GCCGCCACATCTCCATCGGCGATCCGGTCACCGAAACCACCCTGCCGGACGGATCGCGCGCGGAGCTCGCGCTCGGCGAG
GAGGTCACCCCGAGGGGGTCGGCGTTCACCATCCGGAAGTACAGCGAGGAGCCGTTCACGCCCGCAACCCTGGTCGACTA
CGACACGTTCAGCCTCGACCAGATGGCGTACCTCTGGCTGGCCATCGAATCCAACAAGAGCCTGCTTTTCGCGGGCGGTA
CCGCCTCGGGGAAGACCACGTCGATGAACGCCGTGTCGATGTTCGTGCCGCCGCGGGCGAAGATCCTCACCATCGAGGAC
ACCCGCGAGCTTGCGCTGTACCACGACAACTGGCTGTCGTCGGTGACCCGGGGGGCGGACGGCGGCGGCGGAGACACCAT
CACGATGTACGATCTGCTGCGGTCGGCGCTCCGCCACCGCCCCGAGTACATCATCGTCGGCGAGGTGCGCGGCGAGGAAG
CGATGACGCTGTTCCAGGCGATGAACACGGGCCACACGACGTATTCGACGATGCACGCCGACAGCGTGCAGACGGTCATC
AACCGCCTCGAAAACGACCCCATCAACGTCCCGCGGGCGATGATCCAGAGCCTGGATATCCTGTGCGTGCAGACGCTCAC
GCACGTCGGTGACGAGCGCGTTCGCCGCAGCAGCGTGATCGCGGAGATCGAGGGGATCGACCAGCGCACCGGCGACCTCG
ACTACTCCACGGCGTTCGAATGGGACCCCACGCGCGACGACTTCGAGCAGCGCGACTCGAACGTCCTCGACGAGATCCAG
GACGAGCGCGGGTGGTCGCGAAGCGACCTGCTCCGGGAGCTCAGGAACCGCAAGCGCGTCCTCCAGTATCTCGTCGAGCA
GGACGTGACCGACTACCGCCGGTTCACGGCCCTGATCAACGAGTACTACGCGCAGCCCGAGCGCGTGGTCGCCCGCGTCA
CCGACGCGCTCGATTCGGACGTCGCGGCCGCCGCGCCGGGGGTCGTGGAGTGA
pI
0
MW (k)
0
Translation (551 aa,
Edit
)
>gspE|2215|gene
MAGDLFAGLDGGFDALQRRASRIVEVLRGTAVDVPPYDPQAHGPLVEFDGVADYEEVDRYWVNAPYAFVFIGFDAESDTH
YYHVVEPHLDDFEQTVLDQLYDDIRDALIYDATTDPDDREAVLIAQMQRLLSEYSIDVTPNAFHRLFYYLHRTFEGFEKL
DPVMQDPHIEDVSCDGYGLPLFVYHTDYTDIETNITYEQQELDSFVVRLAQQSGRHISIGDPVTETTLPDGSRAELALGE
EVTPRGSAFTIRKYSEEPFTPATLVDYDTFSLDQMAYLWLAIESNKSLLFAGGTASGKTTSMNAVSMFVPPRAKILTIED
TRELALYHDNWLSSVTRGADGGGGDTITMYDLLRSALRHRPEYIIVGEVRGEEAMTLFQAMNTGHTTYSTMHADSVQTVI
NRLENDPINVPRAMIQSLDILCVQTLTHVGDERVRRSSVIAEIEGIDQRTGDLDYSTAFEWDPTRDDFEQRDSNVLDEIQ
DERGWSRSDLLRELRNRKRVLQYLVEQDVTDYRRFTALINEYYAQPERVVARVTDALDSDVAAAAPGVVE
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment