The
Halobacterium
sp. NRC-1
Genome
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repH
Gene ID
6013
Gene Name
repH
Annotation
replication protein
Location
pNRC200:9210→12428
Gene type
Functional gene
GC content
54.893
Hydropathicity
-0.540820130475302
DNA (3219 bp,
Edit
)
>repH|6013|9210|For|12428
atgctgccaggcttcgccccggatgtcgttgtgaagcatcgtcgcagcggaccagcagagccggtcctcaacacggatgg
agcggtattatcagtacgctcctatctacaatgtggacgcgaggggtcaaattggtttcgggaccctcgcatttgccggc
ttccacgcagtccgcacttctccacggactgcatgcacacgcctaatcaacaacaaggaatccggaagatcgttccagga
gggaccctctctactgctggaattaccattaccgaggtcaccccacgggtaacagaatggatacctgaccttcttgagga
actactgccacggagtattcaatcggttcgaaaattcatccggcaagaagacccagaagtcctcacgcacgcacgataca
acaccgtctatcgccgtcttcaagaggaaaccctgaggttcgaccatcaagaatggtgctccacaacggatatttggagt
gatgcagaggctgaagcggttgaatacgtagaatcacttgtcgagttcgcagtcaaatattctgacgttgacgaagatga
tctcgacgaactttcggagtatcaccagcagcggtgcaaatcgcttaaacagactctcactacgatcagtaccggacgtg
gcccactcaacgctggccttgaagccctcgccaagggacccgtacgactccacgatgagctcgatgacgcaccgcaaccg
atcacgcttgtccttgatggcgagttgtggtcaaaactcgacgatagaggaacaggtatccgagcacttgcagctatcgc
cgtgctcggctccaccttcgacgtccgcctggttatttcaccagcgttagacgccgcgattgagcgacggtatccagact
ggtatgactcccatctccgtcttactgaaacccgtgagacctcctctgtagaatcagcgggtggcgacggacaaccatcg
gcggagcagctcgaggaagcatgggaagcaatacagaacctcccagaggaatcagggagactccgtcttctccggaacct
ccctatagagggctctcgagactatcgtgatctcaagcaggatgatgagattgacgtgcaggcagggactgtcggccgtt
acatcctcgatctagaagaattagggcttgtggatatcgaccgtcgtggacaatacaacagcgcatccctcaccggctta
ggacaagtagcagttgagcagtatgtcaccacggactaccgggtgatccatccgacccaatcgacgctggagacgcatct
tacgccgacccctcagccccaagcaagtacagtgtatcccgcgcgatcggacacgagggagggggatcagcctgggacag
cggaggattggatagctgcgacaggcagtcctagtgagggtgctgactacgttcaatggctcgatgggccgtctggtgtt
ctcgacgcttggggaatgcatcagcggtaccttgctggccgtcgagatcgtggtgtcaccctagtcgatgaccgtatcga
gcgtttcgaggacggtcgcgtatcgtatctcagttgcttcgacgatgatctcttcgtagccactcagtggggcggccccc
ttcctaccctgggacgtattgcgggtgccttactcagcgacaaagcactgagtaagatccttaccccttctcgtctcgga
aaccagttcgaagaaatcaacgatgcggtcgttgaacaactcgatagagaagctggggaaatcatccgtagaggacacca
aatcggctggttcagcgaggacgaagaagactacgatggttggcgtgagcgtattggctccgttcgcagtctgtgtttgc
aacaagttggtgaactcacaaacagtgacgacgtcgaagcccggactgagttactacgtgacctgcacggcttggttgcc
tcagcgacacagctgtactacgcagccggtgtagacgtcacaatcaacgttcgagtccctgacacgggaatgctcatcag
cgatgaacgccgtctcgacgatttcctcggtttcgcccggtacaccattccgaaacagtccgtgtacgggattcattcgg
ggtataggatgctcctcgaggatcgaccggagaaactcaaacgacgtcttccctacgaggtggatgatgctgattccaca
atgcatctgaccgcatcgtgggttttctccggatcaacgatgatcgatcttcacgatgacatcgaggacgccattgaaat
ggagaccaacgaaattcgtgaagcaattgctaatggacaggagtcagcaccggtaatggaaatccccgtccagattggga
actcctactcagcaattcgtaatcacgtcgaagactacgcttcagcgaagaactaccaggtagctcaccaggaggatatt
cacgaaggaaaacaggatctcgagcgactcgtccgcctgttcctccgtgtcctcgggacagaggatcgaccacatcgagc
gtgtcctcacgacgttgccgaggcaatgcttcatgttgctcaatcctcccggaactacgatttcatcaccgtgcgagaca
tctcgtacggactgtcgaatctccccacgaaacgactcttacccgagctcccaccaacagcaacgaagctcctcaaaacc
ctgcttgatgcggatgacccgatgggacggtctgaaatcatcgataccgctgacatttcggaaagtagctatgatcgcta
catcaacgaactcgccgcttgggatatcattgaaccccgcgaaatcgagggacaccgtcggtgggaagctcacttagagc
cgtggtggacaccgcagagtgatcgagacgaaccctatgccgaccctgaccccgacacgggaatactgtacgctgaattt
ccccgtgatgtcgctagtgcggtgatgtgccacctcatcacccactacgacttacccgaccttgagacagcgtatcttga
gggtatccaaccgggggacgacatcaaggccctcttcgatgatcacgaccgactcagacgatggcggccattcctctggg
gtgcattcgccgactcggacaaacttgaaagaggcccatctggtacagcagcttcggactcgaccgtagttcgtctcggt
caatctccaggacccgacacagcacaatcgagcttccaagacgtctcagaaacagcaacccaacgagatcgtctcagtca
accgtcgccagggctggactaa
pI
4.48
MW (k)
120.57755
Translation (1073 aa,
Edit
)
>repH|6013|gene
MLPGFAPDVVVKHRRSGPAEPVLNTDGAVLSVRSYLQCGREGSNWFRDPRICRLPRSPHFSTDCMHTPNQQQGIRKIVPG
GTLSTAGITITEVTPRVTEWIPDLLEELLPRSIQSVRKFIRQEDPEVLTHARYNTVYRRLQEETLRFDHQEWCSTTDIWS
DAEAEAVEYVESLVEFAVKYSDVDEDDLDELSEYHQQRCKSLKQTLTTISTGRGPLNAGLEALAKGPVRLHDELDDAPQP
ITLVLDGELWSKLDDRGTGIRALAAIAVLGSTFDVRLVISPALDAAIERRYPDWYDSHLRLTETRETSSVESAGGDGQPS
AEQLEEAWEAIQNLPEESGRLRLLRNLPIEGSRDYRDLKQDDEIDVQAGTVGRYILDLEELGLVDIDRRGQYNSASLTGL
GQVAVEQYVTTDYRVIHPTQSTLETHLTPTPQPQASTVYPARSDTREGDQPGTAEDWIAATGSPSEGADYVQWLDGPSGV
LDAWGMHQRYLAGRRDRGVTLVDDRIERFEDGRVSYLSCFDDDLFVATQWGGPLPTLGRIAGALLSDKALSKILTPSRLG
NQFEEINDAVVEQLDREAGEIIRRGHQIGWFSEDEEDYDGWRERIGSVRSLCLQQVGELTNSDDVEARTELLRDLHGLVA
SATQLYYAAGVDVTINVRVPDTGMLISDERRLDDFLGFARYTIPKQSVYGIHSGYRMLLEDRPEKLKRRLPYEVDDADST
MHLTASWVFSGSTMIDLHDDIEDAIEMETNEIREAIANGQESAPVMEIPVQIGNSYSAIRNHVEDYASAKNYQVAHQEDI
HEGKQDLERLVRLFLRVLGTEDRPHRACPHDVAEAMLHVAQSSRNYDFITVRDISYGLSNLPTKRLLPELPPTATKLLKT
LLDADDPMGRSEIIDTADISESSYDRYINELAAWDIIEPREIEGHRRWEAHLEPWWTPQSDRDEPYADPDPDTGILYAEF
PRDVASAVMCHLITHYDLPDLETAYLEGIQPGDDIKALFDDHDRLRRWRPFLWGAFADSDKLERGPSGTAASDSTVVRLG
QSPGPDTAQSSFQDVSETATQRDRLSQPSPGLD
Set Format
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Comment
An autonomously replicating region of pNRC100 and pNRC200, containing a 550 bp AT-rich sequence upstream of the repH gene, was isolated by its replication ability in both Halobacterium sp. NRC-1 and Haloferax volcanii. See [Ng and DasSarma J Bacteriol. 1993 Aug;175(15):4584-96](https://www.ncbi.nlm.nih.gov/pubmed/8335618).