The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
polB1
Gene ID
826
Gene Name
polB1
Annotation
DNA polymerase I
Location
chromosome:778999→783057
Gene type
Functional gene
GC content
59
Hydropathicity
-0.594674556213017
DNA (4059 bp,
Edit
)
>polB1|826|778999|For|783057 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGACCACGCCAGATGGCCAATTGACGCTCGGCCAGTGTGCCGGGAAAGAGTCTGGTGGCACAGGCGACACGCGGCCTGA
CGAGGAGGCCGCCATCGTCGCCGGCGACGCCGGCCAGCACGTCTCCGATGTTATCGACACGGACGAGGTGCGCTTTCCCG
ACCCCGACGGGACGGTCGAAATAGCCGTCACACAGGTTGACTACACCATCGAGGGTGCGGGCCGAGACGAGTATCCCGTG
CTCCATATCTTCGGCCGGACCGCGGACAACGAGACCGAACACGTCCGTGTTCTCGGATTCAGACCGTACTTCTACGCCCC
CACCGATAGCCTCGACGACGAACTCCTCGACAAGGATGTCATCACCGGGACCGAACCCGGCTACGAGAGTATTCGCGGCG
AAGAACTGACGAAGATATTCGGCCGTACGCCCCGCGACGTCGGACAGATACGTGACGAGTTCGACCACTACGAAGCGGAC
ATTCTCTTCCCGAACCGTCTCCTCATCGACAAGGACATAAACGACGGCGTTCGCGTCCCCGCCCGCCGTCTCGACGACGG
GACGATTCAGATTCCCCACCAAGAAATCGAGCCAACGTCGGTCGAGGCGGACCTTCGGGTGAACACCTTCGACATCGAGG
TCAACGACCGAAACGGCTTCCCCGAAGACGGCGAGGAGCCGATTATCTGTCTCACCAGTCACGACTCCTATCGGGACGAG
TACATCGTCTGGCACGCGGTCGCGCCTGATGGCGAAGGCAAACGACCTGACTCGCTTCCGGGCTACGACTACCTCCGCGA
CGGCTCTGCGGTCGAAGTTCGAACGTTCGACGAGGAGGACGCGATGCTCGACGCGTTCGTTTCCTACCTTGAGAAGACCG
ACCCGGATATTTTCACGGGCTGGAACTGTCTCCCCGAAGACACTCGCGTGCTTCTCGCAGACGGTACGGAGAGGAAAATC
TGCGACGTGGAGGTCGGGGATACAGTCGTCGGGTCCGATAACCAACAGACGACGGTCGCAGAGGTCACGAACACGTGGGA
GAGCAAAAAGGAGGTGAAAGAGTTCGAACTCGCCGATGGGACGACACTCCAAACCTCCGACGAGCACCGCATCATGGTCG
GGGACGACGAGGCCGTCGACTGGAAAGAAGGTAGGGACGTTCAGGTCGGCGATTACGTTCTCAAACCGCGGAAACTCCGC
GTCGACGACATCCGGGTCCCAACGCTCGCTGACCTCGTGCCGGACCACTGTCAGCGCTTTACCGACCAAGACTCCGTCAA
AGCGTTCAAAAAGCACCTCCCGTACGGTGCTGTGAGTGAGCTTTCGGACGAGTTCGGTGTGGCGAAAGGGACACACTATC
ATCCACATACTGACACGTGGACTCCGGAGCGGTGCGAGCAGGCGGCTGAACGGTACGACATTCCGATGCCCGACGGGGGA
CGGAGCTACCGCCGGACGGGCGTCGACCTCGACCGTGAACTCACCGCGCACGAACTGTACCTTGCCGGGCTTGTTCTCAC
CGACGGGACCATGTCGGAAGACGACGGGATACGGTTCTACAACACCCGGACAGAACTCCACGACCAGTTCCCGGGTGGAA
ACTCGCTCACAGCCGACGGGAAGGGCTGTTTCAAGCAGGGCGTTCTCGACTACGCCACGATGCATGCGTTTAACGGGCTC
GGTATCCCGTTCGGAGACAAGAACGCCGGAGAGGTCGACCTCTCGACCATATATCGACTTCCCGAGCGATACATTGCTCA
GTTCCTCGCGGGTGTTATCGACGGTGATGGCTGCATCTCTTCGAGCGTCACAATCGCCGCTGAGAACAAGTCTATCGGCA
AGTGGTACGTGCGGCTCCTCCAGCGGCTGGGTGTGTACGCCCAGCAGCGCGAACATATCGTTCGGATTCCCGACTCGGCT
CGTGAGATCGACCGACTGAAGCAATTCGTCCTCCCGCACATGAGCCACCCGGAGAAGGTCGGCCGACTTGCTGCCTTCGA
GGGCGGACAAAGTGGGGCCACCGAGAACATCCCGTACGCACTGTTCGACGCGGCAACTGGAACCGACGAGAAACGAATTG
GAAACGACAAGTGGCGTCGGGGAATCAATCTCAAGCGATACGAGACGAAAGCTGACGACTGGGAGGAGTACGTTTTCGTC
GAGGTCACGGACATCTCTCGTGTCGGCGTCGAGACGACGTACGACCTCGAAACAACGACTCACAACTTCGTCGCGGAAGA
CTGCCTCGTCCATAACTGCGACGACTTCGATATTCCCTATTTCCTCGACAGACTCGACGTGCTGAACCCGACGAGCGATT
ACGACCTCGACTACAACCGTATGTCCCGACTCGGCGAAGTCTGGCGCGGCGGCTGGGGCGGCCCGGACATCAAAGGCCGC
GTCGTCTTCGACCTCTTGTACGCATACAAGCGGACACAGTTCACGGAACTCGAATCCTACCGACTGGACGCGGTCGGTGA
ACTCGAACTCGACGTGGGCAAAGAACGCTACTCCGGCGATATTGGCGACTTGTGGGAACAGGACCCGGAACGCTTGCTCG
AATACAACCTTCGTGACGTGGAACTGTGTGTCGAAATCGACCGCAAACAGGATATCATCGCGTTCTGGGACGAGGTGCGG
ACGTTCGTCGGCTGTAAGCTCGAAGACGCGCCGACGCCGGGAGATACCGTTGACATCTACGTCCTCCACAAGGTTCACGG
CGAATTTGCCCTGCCTTCAAAAGGGAAACAGGAGTCGGAAGACTACGAGGGTGGGGCCGTTTTCGACCCCATCACGGGCG
TCAAAGAGAACGTCACGGTGCTCGACCTGAAGTCGCTGTACCCGATGTGTATGGTGACCATCAACGCGTCGCCGGAGACG
AAAGTCGACCCCGAGTCGTACGACGGCGATATGTTCCGTGCGCCCAACGGGACGCACTTCCAGCAGGAACCCGACGGCAT
GATTCGGGAGATGGTCGACGAACTCCTCACGGAGCGTGAGGAAAAGAAGGCACTTCGAAACGAACACGACCCGGGTTCGT
CCGAATACGGGCAGTTCGACCGCCAACAGCAAGCTGTCAAGGTTATCATGAATTCTCTCTACGGCGTGCTGGGCTGGGAC
CGCTTCCGCCTCTACGACAAGGAGATGGGTGCGGCGGTGACGGCGACCGGTCGAGAGGTCATCGAGTTCACGGAGCAAGC
GGCCAACGAAATCGGATACGAGGTCGCATATGGGGATACTGACAGTGTCATGCTCGAACTCGGTCCTGACGTGTCCACGG
AGGAAGCAATCGAGCAGTCCTTCGAGATTGAAGAGCACATCAACGCCGCCTACGACGACTTCGCACAGGAAGCGCTTGAC
GCAGGCGAACACCGCTTCCAAATCGAGTTCGAGAAGCTCTACCGACGATTCTTCCAAGCGGGGAAAAAGAAGCGCTACGC
TGGACACATCGTCTGGAAAGAGGGCAAAGATGTCGACGACATCGACATCACCGGGTTCGAGTACAAACGCTCCGACATCG
CCCAGATTACGAAGGAGGTCCAGAAGAACGTCATCGACATGATTGTCCACGGGCAGGACACCGAAGACATCAAAGAGTAC
CTCCACGACATCATCACCGACTTCCAATCCGGTAATCTGCCGTTAGAGGAAGCTGGTATCCCCGGCGGCATCGGGAAACG
ACTGACCGCGTACGAGACGCCGACTGCGCACGTGCGCGGCGCACAGTACGCCAACGCGTTCCTCGGGACGAACTTCGGCC
GCGGGTCGAAACCGAAGCGCGTCTATCTCAAGAAAGTCCATCCGTCGTGGTTCAGGAAGCTGGAAGACGGGGACTTCGAC
CCGCAGATGGACGACCTCTACCGCGACTTCAAGCGCGACCCCGACGTGATTTGTTTCGAGTACGCAGACCAGATTCCCGA
CGAGTTCGAAGTCGACTGGGACACGATGCTCGATAAGACGCTGCAAGGCCCGATTTCCCGCGTCATCGAGGCGCTCGGGA
TGTCGTGGGACGAGGTGAAAAGCGGCCAAGAACAGACCGGTCTCGGGAGCTTCATGTGA
pI
4.2557
MW (k)
152849
Translation (1353 aa,
Edit
)
>polB1|826|gene DNA polymerase I [Haloferax mediterranei ATCC 33500]
MTTPDGQLTLGQCAGKESGGTGDTRPDEEAAIVAGDAGQHVSDVIDTDEVRFPDPDGTVEIAVTQVDYTIEGAGRDEYPV
LHIFGRTADNETEHVRVLGFRPYFYAPTDSLDDELLDKDVITGTEPGYESIRGEELTKIFGRTPRDVGQIRDEFDHYEAD
ILFPNRLLIDKDINDGVRVPARRLDDGTIQIPHQEIEPTSVEADLRVNTFDIEVNDRNGFPEDGEEPIICLTSHDSYRDE
YIVWHAVAPDGEGKRPDSLPGYDYLRDGSAVEVRTFDEEDAMLDAFVSYLEKTDPDIFTGWNCLPEDTRVLLADGTERKI
CDVEVGDTVVGSDNQQTTVAEVTNTWESKKEVKEFELADGTTLQTSDEHRIMVGDDEAVDWKEGRDVQVGDYVLKPRKLR
VDDIRVPTLADLVPDHCQRFTDQDSVKAFKKHLPYGAVSELSDEFGVAKGTHYHPHTDTWTPERCEQAAERYDIPMPDGG
RSYRRTGVDLDRELTAHELYLAGLVLTDGTMSEDDGIRFYNTRTELHDQFPGGNSLTADGKGCFKQGVLDYATMHAFNGL
GIPFGDKNAGEVDLSTIYRLPERYIAQFLAGVIDGDGCISSSVTIAAENKSIGKWYVRLLQRLGVYAQQREHIVRIPDSA
REIDRLKQFVLPHMSHPEKVGRLAAFEGGQSGATENIPYALFDAATGTDEKRIGNDKWRRGINLKRYETKADDWEEYVFV
EVTDISRVGVETTYDLETTTHNFVAEDCLVHNCDDFDIPYFLDRLDVLNPTSDYDLDYNRMSRLGEVWRGGWGGPDIKGR
VVFDLLYAYKRTQFTELESYRLDAVGELELDVGKERYSGDIGDLWEQDPERLLEYNLRDVELCVEIDRKQDIIAFWDEVR
TFVGCKLEDAPTPGDTVDIYVLHKVHGEFALPSKGKQESEDYEGGAVFDPITGVKENVTVLDLKSLYPMCMVTINASPET
KVDPESYDGDMFRAPNGTHFQQEPDGMIREMVDELLTEREEKKALRNEHDPGSSEYGQFDRQQQAVKVIMNSLYGVLGWD
RFRLYDKEMGAAVTATGREVIEFTEQAANEIGYEVAYGDTDSVMLELGPDVSTEEAIEQSFEIEEHINAAYDDFAQEALD
AGEHRFQIEFEKLYRRFFQAGKKKRYAGHIVWKEGKDVDDIDITGFEYKRSDIAQITKEVQKNVIDMIVHGQDTEDIKEY
LHDIITDFQSGNLPLEEAGIPGGIGKRLTAYETPTAHVRGAQYANAFLGTNFGRGSKPKRVYLKKVHPSWFRKLEDGDFD
PQMDDLYRDFKRDPDVICFEYADQIPDEFEVDWDTMLDKTLQGPISRVIEALGMSWDEVKSGQEQTGLGSFM
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment