The
Halogeometricum borinquense
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
Hbor_17000
Gene ID
17000
Gene Name
Hbor_17000
Annotation
uncharacterized membrane protein, required for N- linked glycosylation
Location
chromosome:1630865←1627620
Gene type
Hypothetical gene
GC content
0.6
Hydropathicity
0.0809435707678084
DNA (3246 bp,
Edit
)
>Hbor_17000|17000|1630865|Rev|1627620
ATGAGCGTAGACAACGAGCGTCGCGAGGACCACGAGACGACTTCGGTCCTCGAGCGCTTCGAAGACTGGTACCACATCCC
CGCCTTACTCGTGGTGATGGTCCTTATGTTGACCATCCGACTCCAGTCGTATAGCAAGTTTATCAGAAACGGAGAAGTGT
TCTTTGACGGAAATGACGCGTGGTATCATCTCCGCGAGGTGAGTTACACCGTCAGGCATTGGCCCTCCACGATACCATTC
GACCCGTGGACGCATTTCCCCTACGGAACGAGCGTCGGGCAGTTCGGGACGCTCTACGACCAAATCGTCGCAACTGCGGC
TCTTGTCATCGGACTAGGTAGTCCAAGCCAAGAGCTCATTGCGAAGACGCTGTTGGTCACGCCCGCCGTATTCGGCGCGC
TGACAGCGATTCCGGCCTACATAATCGGTAAACGACTCGCCGGTCGTGGTCCGGGCGTCTTTGCGGCGATTCTTCTCGGA
CTCATGCCGGGTCTGTTCCTCCAGCGGACCCTCGTTGGCGTCTCCGACCACAACGGTGTCGAGCCGTTCTTCCAAGCCAT
ATCCGTCGCCGCATTACTGATCGCGTTCGCGGTCGCCGAGAAAGAGATGCCCATCTGGGAAATCGTCGCAGAGCGCGACT
TCGACGCCATTCGGTCGTCGACCAAGTGGGCAGTCATCGCAGGCGTTGCCACGGCCCTCTATATGTGGGTGTGGCCGCCG
GGTGTTCTCATCGTCGGCGTCCTCGGGGCGTTCGTCCTCGTGAAGATGGCGAGCGACGTTGCGAACGGGAAGAGCCCGGA
GCCGACGGCGTTCGTCGCCGCCGTCTCCATGGGTGTCACCGCCGTGCTGATGGTTATTCAAATCGAGGAGTTCGGATTCT
CTGCGACCAGTTTCTCACTGGTACAGCCGCTTCTTGCACTCATCGTCGCTGGTGGCGCTGTCTTCCTCGCATGGTTTGCT
CGACAGTTCGAATCCCGCGACGTGAGTCCGAGTTTCTACCCCGCAGCCGTCTTTGGGATCGTTCTTATTTCACTCGGGAT
CGTCTACTTCGTACTTCCCGGGATGTGGCGACTCTTGTCGAACAACTTCCTTCGCATCCTCGGGTTCAGCGCCGGTGCAA
CGACCCGGACTATCGGTGAGGCACAACCGTACCTCTCTCCCGACACTCTCAGCCGACTTCAGCTGACACCAGTGAACCGT
ATCGTCGCCGACTACGGTTTCACGCTGTTCACTGGAATTGCGGGTGCGACGTGGATGCTCGCAAAGCCGCTCGTTCAGCG
AGGCAACACCCGCGACTACGGCTACGTCTTCGGCGGTCTGGCGATTATTGGACTCATCTTCCTCGTCCCCGCCTTCCCGA
ATGGCATCGGTAGCCTCCTCGGAATCAGCGGTCAACTTGTCGGCCTCGCACTGGTGAGCGCCATTATCGTCGGTGCTGCG
CTACTCGCAAAGCAGGACCCCGAACACCTGTTCGTCATCGTCTGGGCGGTCTTCATGACCTCCGCGGCGTTCACCCAACT
TCGCTTCCACTACTATCTTGCCGTCATCGTCGTCGTCGTGAACGCGTACCTCCTCAGCGAGGTACTCTCATTCCTCGACG
TTCGCGCCACGATGTCGACCGTGACGGATCTCGAACTGTATCAGGTCGTCTCGATCGCCATGGTCGTTCTTCTCATCGCA
GCACCCGTTCTCCTCGTTCCGCTCAACGTCCGGAACACGGAAACGGCGGCGCTCGACAAGTCGAACACGGCGTGGGAGAC
GAGCCAGGGGCACAGTCCGAGTGAGGTTCTCAAATGGGAATCCTCGTTCGAGTGGACCAAAGAGAACACGCCGAAAGAAG
GCACGTTCGGCGGTGCGAACAACGAGATGGCGTATTACGGATCGTACGAGAAGACCGACGACTTCCAGTACGCGGACGGA
TCCTACGGGATCCTCTCGTGGTGGGACTACGGTCACTGGATCACCGTCCAAGGTGAGCGAATCCCGAACGCTAACCCGTT
CCAGGAAGGTGCAACTGACTCGGCGAACTTCCTGCTCGCGCCGAACGAGACGCAAGCACAGGACGTTATCGCCTCCCAGA
GCACCGAAGGAAACAACACCCGGTACGTGATGGTCGATTGGAAGATGGCCACGCCCGGGTCGAAGTTCAGCGCTCCATCG
GTGTTCTACGACGCCGAAGATAACTTCTCGTCCGCAGAATTCTACGAACAGCGCGTTTACCGCTTGAACGATGGGAGACC
CACTGGGAACTTCCTCGTCCGCGACCAGCGGTTCTACGACAGCATGATGACGCGCCTGTACTACTACCACGGTAGTGCGA
AGGACCCGTCGGCCATCGTCGTAGACTGGGAACCGCGAACCGTACAGACGTCGCAGGGTCCCGTAAGCGTCGCCGGTAAT
CCGGCCGGTAACGCGACGCTCGTCCGGAGTTTCGATGGGAACATGAGCGCGGCCAAGGAGTTCGTCGAGGAAGACGGAAC
CTCGCAGATCGGTGGCATCGGTACGTTCCCCGAGGAGCGCGTGCCAGCACTCGAACACTACCGTCTCGTGAAGGTGAGCA
ACTCCAGCGCCACCTCGTCGAACGACTACCTGCAACTCGTCTACGGTGACGCGCGTGCCGCGCAGGTCAGACCGCAGGCA
ATGCTCCCGAGAAGCAGTGCCGCGTGGGTCAAGAGCTTCGAGCGCGTCCCCGGTGCGACGGTGCAAGGTAGCGGTGCGCC
CGCGAACAGCACTGTCACCGCGAGCGTCGAGATGGAGATTCCGACCGAGAACAGCACATTCGAGTACACACAACAGGCCC
AAACGAACGAGGACGGCGAGTTCACGATGACGCTCCCGTACTCGACGACGGGCTACAGCGAGTACGGCCCGGACAACGGC
TACACGAACGTCAGCGTCCGCGCGACTGGCCCGTACACCATCTCGTCCGGTGCAAGTCTCAACGAAAGCGGCTACATCGT
TGGCTACCAGTCGAACCTCTCCGTCTCGGAGGGACAGGTCAACGGTGACAAGGCCGGCGACATCTCCGTCGAACTGCAGC
GGACGGCGCAGAAACTCGAACTGACCACGGGTCAGTCGTCGGACTCCTCGGATTCGTCTGACTCGTCGGGGTCGTCGGAT
TCGTCGGAATCAACTGATTCGTCCAGTTCGTCGGATTCGTCTGACTCCTCGGATTCGACCGATAGCACGACGTCATCATC
TATCGTCGTCCCCGAGTCGGCGTTCGCGGCGAAACCCGCAGTATAG
pI
4.4082
MW (k)
117060
Translation (1082 aa,
Edit
)
>Hbor_17000|17000|hp
MSVDNERREDHETTSVLERFEDWYHIPALLVVMVLMLTIRLQSYSKFIRNGEVFFDGNDAWYHLREVSYTVRHWPSTIPF
DPWTHFPYGTSVGQFGTLYDQIVATAALVIGLGSPSQELIAKTLLVTPAVFGALTAIPAYIIGKRLAGRGPGVFAAILLG
LMPGLFLQRTLVGVSDHNGVEPFFQAISVAALLIAFAVAEKEMPIWEIVAERDFDAIRSSTKWAVIAGVATALYMWVWPP
GVLIVGVLGAFVLVKMASDVANGKSPEPTAFVAAVSMGVTAVLMVIQIEEFGFSATSFSLVQPLLALIVAGGAVFLAWFA
RQFESRDVSPSFYPAAVFGIVLISLGIVYFVLPGMWRLLSNNFLRILGFSAGATTRTIGEAQPYLSPDTLSRLQLTPVNR
IVADYGFTLFTGIAGATWMLAKPLVQRGNTRDYGYVFGGLAIIGLIFLVPAFPNGIGSLLGISGQLVGLALVSAIIVGAA
LLAKQDPEHLFVIVWAVFMTSAAFTQLRFHYYLAVIVVVVNAYLLSEVLSFLDVRATMSTVTDLELYQVVSIAMVVLLIA
APVLLVPLNVRNTETAALDKSNTAWETSQGHSPSEVLKWESSFEWTKENTPKEGTFGGANNEMAYYGSYEKTDDFQYADG
SYGILSWWDYGHWITVQGERIPNANPFQEGATDSANFLLAPNETQAQDVIASQSTEGNNTRYVMVDWKMATPGSKFSAPS
VFYDAEDNFSSAEFYEQRVYRLNDGRPTGNFLVRDQRFYDSMMTRLYYYHGSAKDPSAIVVDWEPRTVQTSQGPVSVAGN
PAGNATLVRSFDGNMSAAKEFVEEDGTSQIGGIGTFPEERVPALEHYRLVKVSNSSATSSNDYLQLVYGDARAAQVRPQA
MLPRSSAAWVKSFERVPGATVQGSGAPANSTVTASVEMEIPTENSTFEYTQQAQTNEDGEFTMTLPYSTTGYSEYGPDNG
YTNVSVRATGPYTISSGASLNESGYIVGYQSNLSVSEGQVNGDKAGDISVELQRTAQKLELTTGQSSDSSDSSDSSGSSD
SSESTDSSSSSDSSDSSDSTDSTTSSSIVVPESAFAAKPAV
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment