The
Haloterrigena salifodinae
strain BOL5-1
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
HTS23670
Gene ID
23670
Gene Name
HTS23670
Annotation
pectate lyase
Location
pHTS280_6:123226→125331
Gene type
Functional gene
GC content
0.673314339981007
Hydropathicity
-0.517118402282453
DNA (2106 bp,
Edit
)
>HTS23670|23670|123226|For|125331
ATGACACACAAGCGACGATCCTTCCTGCGAGCGATCGGTGCAGGGAGTCTTGGACTGACGGCAGCAGCGTTTACCAGCGG
CACGGCCGCGGCAGCGACCAGCGTTATGATTCGCGGTGGTGGTGCGGACATCTGGAGTACGGCGGACGCGTTCCACTACT
ACTACGATACCGTTAGCGGAGACGTCGACGTACAGGTACGAAACACCGCGCTCGAGAACACTGACCCCAACGCGAAGACC
GGCATCATGATCCGGGAGTCGCTGGATCCCGCGGCGAAGAACGTGATGCTCCGGCGGACGCCCGACGGCGAGGCGTCGCT
CCAATGGCGGCCGGAAGCGGGCGTCGATACGCTCAGCACGACGTCAGGCGGCGAAGACGAGAGCGAGGTCGAGGGCGGAA
GCCTCGAGGCCGAGTGGCTGCGCCTGCGGCGGAGCGGCGACGTCTTCGAGGCGTACGGCTCGAACGACGGGGAGAACTGG
ACGCTGATCGCCGACGTCGACGCGGAACACGTCGCGTTGAGCGACGACGCGTACGTTGGCCTCCCCGTGACGAGCCACAA
CGTCGGCACGCTCTGTACGGCCGAACTGCGCGATCTGACGGGACTCGAACCGACCGCCAACCGCGATATCGGCGATGTCG
ACGTCGCCGGAAGCGTCGACGTCGAAGAGGGCGTTCCGTTCGTCTCGACCGGCGATACGACCGACGTGACGGCCACGGGG
GCGACGGTACGCGGCGAACTGACCGATCTGGGCGGCGCCGAGTCGGCCGACTGCTACGTCGAGTATCGGGAGGTACCGAC
CGAGTCCTGGACGGCGACCGCCGCGCGAACGCTCGAGGAATCTGGGGCGTTCAGCGTCCGCCTCGACGGTCTCACGAGCA
GGCGGTACTACCAGTACCGCGCGGTCGTCAAGACGAGCGACGGCGATCGGGCGACCGGGTCGACCAGAACGGTCGGGACG
TCCGGTCGGTCGAACGGCCGGACGGTCCGGAACGGGCCGCGAAGCGCGTCGCACGTCGATCTCGCCGACGGGTTCGCGGA
TCCGGCGCCGTGGCTGGACGACGACACGCCCGTCATCGAGATCACCGAGCCGACGCGGCGCCAGCTGTCGGCCGCGGTCG
GGGTCGACGGGCCACGCCTGGTCGTCTTCCAGACCAGCGGCGTGATCGATCTCGCGGAGCAGCGCCTGACGGTGGTCAAC
GACGAACTCTACCTCGCGGGACAGACGGCCCCCTCGCCGGGCATCACGCTCACGCACGGCGATCTCTGGATCGACGCGGA
CGATTGCGTCGTCCAGCACCTGCGGGTCCGGCCGGGTGACGCCAACCTGAACGAGGAGAGCGACTGGGAGCCCGACGGGA
TCAGAACGGGGGACCGAACCGAGAACAACGTCATCGACCACTGCACGACGACGTGGGCGGTCGACGAGAACCTCTCGGTC
GGCTACGACACCGAGAACACGACGGTCTCGAACTGCCTGATCGCCGAGCCGCTGCAGGACGCGACCCACCACAAGGGGGA
CCACGGCTACGGCTCGCTGATCGGTAACAACGCGGAGAACGTCGCGCTCGCGGGCAACGTCTGGGCGCACAACTACGATC
GGAATCCGCGCCTCAAGGAGGGGACCCGAACCGTCGTCGCGAACAACGTCATGTACCACTACCGGGACGGCGCGTGGATG
GATCCCGACACGAAAGCGAGCATCGAAGGTAACGTCTTCCGGCGGCCGGTCAGCGACCAACCCAACGTCTTCGGCGACGG
CGACGCGTACGTCGCCGACAACGTCCTCGAGGGCAGCGACAACCCGATGGTCGGCGACGGGATCACGCGACTCGACTCGC
GGCCGCTCTGGCCCGAGGACCTCGAGGTCTTCGACTCGGAAGACGTCGGCGCACACAATCTCGAGAACGTCGGCGCGCGG
CCGGCCGACCGAACCGCCCACGACGAGCGCGTTCTCGAGCAACTCCGTTCCGGCGACGGCTCGTACATCGATAGTCAGGA
GGAGGTCGGCGGTTACCCCGACCTCGAGGTCAATCGGCAGCGGCTGGACGTTCCACAGAACGGGACGCATGCCTGGCTGC
GCGCAAAAGCACGCGACGTCGAATAG
pI
MW (k)
Translation (702 aa,
Edit
)
>HTS23670|23670|gene
MTHKRRSFLRAIGAGSLGLTAAAFTSGTAAAATSVMIRGGGADIWSTADAFHYYYDTVSGDVDVQVRNTALENTDPNAKT
GIMIRESLDPAAKNVMLRRTPDGEASLQWRPEAGVDTLSTTSGGEDESEVEGGSLEAEWLRLRRSGDVFEAYGSNDGENW
TLIADVDAEHVALSDDAYVGLPVTSHNVGTLCTAELRDLTGLEPTANRDIGDVDVAGSVDVEEGVPFVSTGDTTDVTATG
ATVRGELTDLGGAESADCYVEYREVPTESWTATAARTLEESGAFSVRLDGLTSRRYYQYRAVVKTSDGDRATGSTRTVGT
SGRSNGRTVRNGPRSASHVDLADGFADPAPWLDDDTPVIEITEPTRRQLSAAVGVDGPRLVVFQTSGVIDLAEQRLTVVN
DELYLAGQTAPSPGITLTHGDLWIDADDCVVQHLRVRPGDANLNEESDWEPDGIRTGDRTENNVIDHCTTTWAVDENLSV
GYDTENTTVSNCLIAEPLQDATHHKGDHGYGSLIGNNAENVALAGNVWAHNYDRNPRLKEGTRTVVANNVMYHYRDGAWM
DPDTKASIEGNVFRRPVSDQPNVFGDGDAYVADNVLEGSDNPMVGDGITRLDSRPLWPEDLEVFDSEDVGAHNLENVGAR
PADRTAHDERVLEQLRSGDGSYIDSQEEVGGYPDLEVNRQRLDVPQNGTHAWLRAKARDVE
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment